plot_seqlogo: plotting sequence logo
In SPLINTER: Splice Interpreter of Transcripts
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/main_splinter.R
Description
Plots the sequence logo of a given set of FASTA sequences
Usage
1
plot_seqlogo(fasta_seq)
Arguments
fasta_seq
DNAStringSet or path to fasta-formatted file
Value
sequence logo image
Author(s)
Diana Low
Examples
1
2
head(splice_fasta)
plot_seqlogo(Biostrings::DNAStringSet(splice_fasta$V2))
SPLINTER documentation built on Nov. 8, 2020, 8:13 p.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/main_splinter.R
Description
Plots the sequence logo of a given set of FASTA sequences
Usage
1 | plot_seqlogo(fasta_seq)
|
Arguments
fasta_seq |
DNAStringSet or path to fasta-formatted file |
Value
sequence logo image
Author(s)
Diana Low
Examples
1 2 | head(splice_fasta)
plot_seqlogo(Biostrings::DNAStringSet(splice_fasta$V2))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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