getRnaQuantification: getRnaQuantification function

In GA4GHclient: A Bioconductor package for accessing GA4GH API data servers

Description

Get an RNA quantification by its ID.

Usage

getRnaQuantification(host, rnaQuantificationId)

Arguments

host	URL of GA4GH API data server.
rnaQuantificationId	ID of the RNA quantification requested.

Details

This function requests GET host/rnaquantifications/rnaQuantificationId.

Value

DataFrame object.

References

Official documentation.

See Also

DataFrame, searchRnaQuantifications

Examples

host <- "http://1kgenomes.ga4gh.org/"
## Not run: 
datasetId <- searchDatasets(host, nrows = 1)$id
rnaQuantificationSetId <- searchRnaQuantificationSets(host, datasetId, nrows = 1)$id
rnaQuantificationId <- searchRnaQuantifications(host, rnaQuantificationSetId, nrows = 1)$id
getRnaQuantification(host, rnaQuantificationId)

## End(Not run)

GA4GHclient documentation built on Nov. 8, 2020, 5:47 p.m.