getExpressionLevel: getExpressionLevel function

In GA4GHclient: A Bioconductor package for accessing GA4GH API data servers

Description

Get an expression level by its ID.

Usage

getExpressionLevel(host, expressionLevelId)

Arguments

host	URL of GA4GH API data server.
expressionLevelId	ID of the expression level.

Details

This function requests GET host/expressionlevels/expressionLevelId.

Value

DataFrame object.

References

Official documentation.

See Also

DataFrame, searchExpressionLevels

Examples

host <- "http://1kgenomes.ga4gh.org/"
## Not run: 
datasetId <- searchDatasets(host, nrows = 1)$id
rnaQuantificationSetId <- searchRnaQuantificationSets(host, datasetId, nrow = 1)$id
rnaQuantificationId <- searchRnaQuantifications(host, rnaQuantificationSetId, nrows = 1)$id
expressionLevelId <- searchExpressionLevels(host, rnaQuantificationId, nrows = 1)$id
getExpressionLevel(host, expressionLevelId)

## End(Not run)

GA4GHclient documentation built on Nov. 8, 2020, 5:47 p.m.