calculateTvalue: Calculates modified T-statistics values for the given label...

In CSSQ: Chip-seq Signal Quantifier Pipeline

Description

This calculates the modified T-statistics for the given comparison.

Usage

calculateTvalue(preprocessedData, label, comparison, numSamples)

Arguments

preprocessedData	A RangedSummarizedExperiment-class object from preprocessData.
label	A vector containing the labels to use for the samples in preprocessedData.
comparison	A vector containing the comparison to be made. Names here need to correspond to the sample groups in the sample file (Eg. c("G1",G2") means the comparison G1/G2).
numSamples	Number of samples in the dataset.

Value

A vector that is the modified T-statistics for the comparison and labels given.

See Also

DBAnalyze which calls this function

CSSQ documentation built on Nov. 8, 2020, 6:47 p.m.