is_out_of_bounds: Check if GRanges elements are out of chromosome bounds
In zslastman/RiboStan: Estimates Isoform Specific RPF Footprint Densities
is_out_of_bounds R Documentation
Check if GRanges elements are out of chromosome bounds
Description
Given a grangelist of say N genes with X_n exons, this yields a
length N vector pulled from the mcols of the first element of each
list element
Usage
is_out_of_bounds(gr, si = seqinfo(gr))
Arguments
gr
GRanges or GrangesList of elements
si
seqinfo information about length and names of
chromosomes
Value
a logical vector valued TRUE if GRanges
elements are out of the chromosome bounds
Author(s)
Dermot Harnett, dermot.p.harnett@gmail.com
zslastman/RiboStan documentation built on June 12, 2024, 1:59 a.m.
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| is_out_of_bounds | R Documentation |
Check if GRanges elements are out of chromosome bounds
Description
Given a grangelist of say N genes with X_n exons, this yields a length N vector pulled from the mcols of the first element of each list element
Usage
is_out_of_bounds(gr, si = seqinfo(gr))
Arguments
gr |
GRanges or GrangesList of elements |
si |
seqinfo information about length and names of chromosomes |
Value
a logical vector valued TRUE if GRanges elements are out of the chromosome bounds
Author(s)
Dermot Harnett, dermot.p.harnett@gmail.com
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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