RegionStats: Compute base composition information for genomic ranges
In wzthu/ATACpipe: An Easy-to-use Systematic pipeline for ATACseq data analysis
RegionStats R Documentation
Compute base composition information for genomic ranges
Description
Compute the GC content, region lengths, and dinucleotide base frequencies
for regions in the assay and add to the feature metadata.
Usage
RegionStats(object, ...)
Arguments
object
A Seurat object, Assay object, or set of genomic ranges
...
Arguments passed to other methods
Value
Returns a dataframe
Examples
print("see https://satijalab.org/signac/reference/regionstats")
wzthu/ATACpipe documentation built on Aug. 12, 2022, 7:38 a.m.
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| RegionStats | R Documentation |
Compute base composition information for genomic ranges
Description
Compute the GC content, region lengths, and dinucleotide base frequencies for regions in the assay and add to the feature metadata.
Usage
RegionStats(object, ...)
Arguments
object |
A Seurat object, Assay object, or set of genomic ranges |
... |
Arguments passed to other methods |
Value
Returns a dataframe
Examples
print("see https://satijalab.org/signac/reference/regionstats")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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