plotSpectra: Plot pair-wise spectra
In tnaake/MetCirc: Navigating mass spectral similarity in high-resolution MS/MS metabolomics data metabolomics data
View source: R/plottingFunctions.R
plotSpectra R Documentation
Plot pair-wise spectra
Description
plotSpectra plots a spectra of a subject and
query spectra. plotSpectra uses ggplot
plotting functionality.
Usage
plotSpectra(sps, subject, query)
Arguments
sps
Spectra object
subject
character, name of spectra that is aligned against,
character with preceding sample name
query
character, name of spectra that is aligned to
subject, character with preceding sample name
Details
Internally, all intensities are normalized to 100%.
Value
ggplot2 plot
Author(s)
Thomas Naake, thomasnaake@googlemail.com
Examples
data("spectra", package = "MetCirc")
plotSpectra(sps = sps_tissue, subject = "SPL_1", query = "SPL_2")
tnaake/MetCirc documentation built on Nov. 3, 2024, 11:16 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/plottingFunctions.R
| plotSpectra | R Documentation |
Plot pair-wise spectra
Description
plotSpectra plots a spectra of a subject and
query spectra. plotSpectra uses ggplot
plotting functionality.
Usage
plotSpectra(sps, subject, query)
Arguments
sps |
|
subject |
|
query |
|
Details
Internally, all intensities are normalized to 100%.
Value
ggplot2 plot
Author(s)
Thomas Naake, thomasnaake@googlemail.com
Examples
data("spectra", package = "MetCirc")
plotSpectra(sps = sps_tissue, subject = "SPL_1", query = "SPL_2")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.