getScore: Function to get low dimensional embedding matrix
In quon-titative-biology/scBFA: A dimensionality reduction tool using gene detection pattern to mitigate noisy expression profile of scRNA-seq

Function to get low dimensional embedding matrix

1	getScore(modelEnv)

modelEnv

output environment variable

Z: N by K low dimensional embedding

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GeneExpr = matrix(rpois(15,1),3,5)
bfa_model = scBFA(scData = GeneExpr,X = NULL,numFactors =2)
Z = getScore(bfa_model)

quon-titative-biology/scBFA documentation built on March 24, 2020, 7:30 p.m.

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