getGeneExpr: Function to extract gene expression matrix from input...
In quon-titative-biology/scBFA: A dimensionality reduction tool using gene detection pattern to mitigate noisy expression profile of scRNA-seq
Description
Usage
Arguments
Value
Examples
Description
Function to extract gene expression matrix from input observation matrix
Usage
1
getGeneExpr(scData)
Arguments
scData
can be a raw count matrix,
in which rows are genes and columns are cells;
can be a seurat object; can be a SingleCellExperiment object
Value
a raw expression matrix in which rows are genes and columns are cells.
Examples
1
2
3
scData = matrix(rpois(15,1),3,5)
GeneExpr = getGeneExpr(scData)
quon-titative-biology/scBFA documentation built on March 24, 2020, 7:30 p.m.
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Description Usage Arguments Value Examples
Description
Function to extract gene expression matrix from input observation matrix
Usage
1 | getGeneExpr(scData)
|
Arguments
scData |
can be a raw count matrix, in which rows are genes and columns are cells; can be a seurat object; can be a SingleCellExperiment object |
Value
a raw expression matrix in which rows are genes and columns are cells.
Examples
1 2 3 | scData = matrix(rpois(15,1),3,5)
GeneExpr = getGeneExpr(scData)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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