dissMatrx_BP4: Example of the output produced by the function...

In pablof1988/goSorensen: Statistical inference based on the Sorensen-Dice dissimilarity and the Gene Ontology (GO)

Example of the output produced by the function sorenThreshold. It contains the dissimilarity matrix at GO level 4, for the ontology BP.

Description

This object contains the matrix of dissimilarities between the 7 lists from allOncoGeneLists, computed based on the irrelevance threshold that makes them equivalent at GO level 4, for the ontology BP.

Usage

data("dissMatrx_BP4")

Format

An object of class "dist"

Details

Equivalence tests were computed based on the normal distribution (boot = TRUE by default) and using a confidence level conf.level = 0.95.

Consider this object only as an illustrative example, which is valid exclusively for the data allOncoGeneLists contained in this package. Note that gene lists, GO terms, and Bioconductor may change over time. The current version of these results were generated with Bioconductor version 3.20.

pablof1988/goSorensen documentation built on Dec. 15, 2024, 12:01 p.m.