scoreArrayFast: Get weight/probability for each amino acid in a sequence
In omarwagih/rmimp: Predicting the impact of mutations on kinase-substrate phosphorylation
Description
Usage
Arguments
Examples
View source: R/pwm-functions.r
Description
Gets weight/probability for the amino acid at each position of the sequence
as an array.
Usage
1
scoreArrayFast(seqs, pwm, do_sum = T, ignore_cent = F)
Arguments
seqs
One or more sequences to be processed
pwm
Position weight matrix
do_sum
If TRUE sum position-based scores per sequence
ignore_cent
If TRUE, ignore central residue before returning
Examples
1
# No Examples
omarwagih/rmimp documentation built on May 18, 2020, 3:11 p.m.
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Description Usage Arguments Examples
View source: R/pwm-functions.r
Description
Gets weight/probability for the amino acid at each position of the sequence as an array.
Usage
1 | scoreArrayFast(seqs, pwm, do_sum = T, ignore_cent = F)
|
Arguments
seqs |
One or more sequences to be processed |
pwm |
Position weight matrix |
do_sum |
If TRUE sum position-based scores per sequence |
ignore_cent |
If TRUE, ignore central residue before returning |
Examples
1 | # No Examples
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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