parseRsubreadLogs: Parse Rsubread Logs for Mapping and Feature Count Statistics

View source: R/alignSingleCellData.R

parseRsubreadLogsR Documentation

Parse Rsubread Logs for Mapping and Feature Count Statistics

Description

Parse Rsubread Logs for Mapping and Feature Count Statistics

Usage

parseRsubreadLogs(alignLog = NULL, featurecountLog = NULL, sampleName = NULL)

Arguments

alignLog

Path to a log file created by the Rsubread align function

featurecountLog

Path to a log file created by the Rsubread feature count function

sampleName

Sample name corresponding to the two log files

Value

A single line of a data frame with alignment and feature count information


mmkhan19/singleCellTK documentation built on March 22, 2022, 7:43 a.m.