plotViolines: Create a violine plot

In mitterecker/cn.farms: cn.FARMS - factor analysis for copy number estimation

Description

This function creates a violine plot on intensity values

Usage

plotViolines(object, variable = "intensity", groups, ...)

Arguments

object	An instance of ExpressionSet
variable	states which variable of assayData should be plotted.
groups	Vector with the dimension of the samples for coloring.
...	Further arguments passed to the lattice graph.

Value

Creates a violine plot.

Author(s)

Djork-Arne Clevert [e-mail] and Andreas Mitterecker [e-mail]

Examples

load(system.file("exampleData/normData.RData", package = "cn.farms"))
normData <- normData[, 1:10]
groups <- seq(sampleNames(normData))
plotViolines(normData, variable = "intensity", groups, xlab = "Intensity values")

mitterecker/cn.farms documentation built on March 10, 2020, 10:19 a.m.