markowetzlab/frenchFISH: Poisson Models for Quantifying DNA Copy-number from FISH Images of Tissue Sections
FrenchFISH comprises a nuclear volume correction method coupled with two types of Poisson models: either a Poisson model for improved manual spot counting without the need for control probes; or a homogenous Poisson Point Process model for automated spot counting.
Getting started
Browse package contents
Package details |
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| Author | Adam Berman, Geoff Macintyre |
| Bioconductor views | BiomedicalInformatics CellBiology Genetics HiddenMarkovModel Preprocessing Software |
| Maintainer | Adam Berman <agb61@cam.ac.uk> |
| License | Artistic-2.0 |
| Version | 0.99.10 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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