Files in llrs/GSEAdv

Analyze Gene Sets Collections Properites

.github/CONTRIBUTING.md .github/ISSUE_TEMPLATE.md CODE_OF_CONDUCT.md NEWS.md R/AllGenerics.R R/GSEAdv-package.R R/add.R R/adjacency.R R/as_GeneSetCollection.R R/calc-nPathways.R R/check-GSC.R R/completness.R R/cond.R R/distr.R R/duplicated.R R/edges.R R/estimate.R R/estimate_sizes.R R/expand.R R/fromSizeGenes.R R/fromSizeGenes_sizePathways.R R/fromSizePathways.R R/gene.R R/genesPerGene.R R/genesPerPathway.R R/keep.R R/modify.R R/n_functions.R R/nested.R R/pathway.R R/pathwaysPerGene.R R/remove.R R/simulate2GSC.R R/simulateGSC.R R/sizes.R R/sizesPer.R R/summary.R R/utilities.R R/zzz.R README.Rmd README.md man/GSEAdv.Rd man/IC.Rd man/Info.Rd man/add.Rd man/adjacency.Rd man/as.GeneSetCollection.Rd man/calc.max.nGenes.Rd man/calc.min.nGenes.Rd man/calc.nPathways.Rd man/check.Rd man/combnGPP.Rd man/combnPPG.Rd man/compare.Rd man/completness.Rd man/condPerGenes.Rd man/condPerPathways.Rd man/distrGenes.Rd man/distrPathways.Rd man/double.factorial.Rd man/drop.Rd man/dropRel.Rd man/duplicatedGenes.Rd man/duplicatedPathways.Rd man/edges.Rd man/equalize.Rd man/estimate.Rd man/estimate.nGenes.Rd man/estimate.nPathways.Rd man/fromGPP.Rd man/fromGPP_nGenes.Rd man/fromPPG.Rd man/fromPPG_GPP.Rd man/fromPPG_nPathways.Rd man/fromSizeGenes.Rd man/fromSizeGenes_sizePathways.Rd man/fromSizePathways.Rd man/gene.Rd man/genesKegg.Rd man/genesPerGene.Rd man/genesPerPathway.Rd man/h_index.Rd man/helper_sizes.Rd man/independence.Rd man/inverseList.Rd man/isolation.Rd man/maxIC.Rd man/modify.Rd man/nGenes.Rd man/nPathways.Rd man/names_vec.Rd man/nested.Rd man/pathway.Rd man/pathwaysPerGene.Rd man/sizeGenes.Rd man/sizePathways.Rd man/sizesPerGene.Rd man/sizesPerPathway.Rd man/summary.Rd tests/README.md tests/spelling.R tests/testthat.R tests/testthat/helper_data.R tests/testthat/test-adjacency.R tests/testthat/test-distr.R tests/testthat/test-edges.R tests/testthat/test-estimate.R tests/testthat/test_add.R tests/testthat/test_asGeneSetCollection.R tests/testthat/test_calcnPathways.R tests/testthat/test_check.R tests/testthat/test_completness.R tests/testthat/test_condPer.R tests/testthat/test_drop.R tests/testthat/test_duplicates.R tests/testthat/test_estimate_sizes.R tests/testthat/test_fromSizeGenes.R tests/testthat/test_fromSizeGenes_sizePathways.R tests/testthat/test_fromSizePathways.R tests/testthat/test_gene.R tests/testthat/test_genesPerGene.R tests/testthat/test_genesPerPathway.R tests/testthat/test_keep.R tests/testthat/test_keeps.R tests/testthat/test_modify.R tests/testthat/test_nested.R tests/testthat/test_pathway.R tests/testthat/test_simulations.R tests/testthat/test_sizes.R tests/testthat/test_sizesPer.R tests/testthat/test_summary.R tests/testthat/test_utilities.R vignettes/vignette.Rmd vignettes/vignette_describe.Rmd vignettes/vignette_evaluate.Rmd vignettes/vignette_simulate.Rmd