parameterSpaceSeurat: Generates a data frame showcasing the dependence between...
In linquynus/RCAv2-beta: Reference Component Analysis
Description
Usage
Arguments
Value
View source: R/parameterSpaceSeurat.R
Description
Generates a data frame showcasing the dependence between resolution and cluster quantity
Usage
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parameterSpaceSeurat(
rca.obj,
stepsize = 0.1,
folderpath = "./",
filename = "Seurat_Parameter_Space.png"
)
Arguments
rca.obj
RCA object.
stepsize
Stepsize used to generate an overview on clustering results.
folderpath
Path to store the html file. Defaults to working directory.
filename
name of the pdf file produced that visuzalizes the parameter space.
Value
a data frame holding parameter values and resulting cluster numbers.
linquynus/RCAv2-beta documentation built on Aug. 9, 2020, 12:34 a.m.
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Description Usage Arguments Value
View source: R/parameterSpaceSeurat.R
Description
Generates a data frame showcasing the dependence between resolution and cluster quantity
Usage
1 2 3 4 5 6 | parameterSpaceSeurat(
rca.obj,
stepsize = 0.1,
folderpath = "./",
filename = "Seurat_Parameter_Space.png"
)
|
Arguments
rca.obj |
RCA object. |
stepsize |
Stepsize used to generate an overview on clustering results. |
folderpath |
Path to store the html file. Defaults to working directory. |
filename |
name of the pdf file produced that visuzalizes the parameter space. |
Value
a data frame holding parameter values and resulting cluster numbers.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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