show.app: View PAGODA application

In hms-dbmi/scde: Single Cell Differential Expression

View PAGODA application

Description

Installs a given pagoda app (or any other rook app) into a server, optionally making a call to show it in the browser.

Usage

show.app(app, name, browse = TRUE, port = NULL, ip = "127.0.0.1",
  server = NULL)

Arguments

app	pagoda app (output of make.pagoda.app()) or another rook app
name	URL path name for this app
browse	whether a call should be made for browser to show the app
port	optional port on which the server should be initiated
ip	IP on which the server should listen (typically localhost)
server	an (optional) Rook server instance (defaults to ___scde.server)

Value

Rook server instance

Examples

app <- make.pagoda.app(tamr2, tam, varinfo, go.env, pwpca, clpca, col.cols=col.cols, cell.clustering=hc, title="NPCs")
# show app in the browser (port 1468)
show.app(app, "pollen", browse = TRUE, port=1468)

hms-dbmi/scde documentation built on April 19, 2023, 10:21 p.m.