snp2ensembl: Map SNPs to Ensembl genes.
In hclimente/martini: GWAS Incorporating Networks
snp2ensembl R Documentation
Map SNPs to Ensembl genes.
Description
Maps SNPs from a GWAS experiment to genes.
Usage
snp2ensembl(gwas, organism = 9606, flank = 0)
Arguments
gwas
A SnpMatrix object with the GWAS information.
organism
Tax ID of the studied organism. The default is 9606 (human).
flank
A number with the flanking regions around genes to be considered
part of the gene i.e. SNPs mapped to them will be considered mapped to the
gene.
Value
A data.frame with two columns: one for the SNP and another for the
gene it has been mapped to.
hclimente/martini documentation built on Feb. 26, 2024, 6:23 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| snp2ensembl | R Documentation |
Map SNPs to Ensembl genes.
Description
Maps SNPs from a GWAS experiment to genes.
Usage
snp2ensembl(gwas, organism = 9606, flank = 0)
Arguments
gwas |
A SnpMatrix object with the GWAS information. |
organism |
Tax ID of the studied organism. The default is 9606 (human). |
flank |
A number with the flanking regions around genes to be considered part of the gene i.e. SNPs mapped to them will be considered mapped to the gene. |
Value
A data.frame with two columns: one for the SNP and another for the gene it has been mapped to.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.