Description Usage Arguments Value Author(s)
Using Rsamtools
functions to manipulate tabix file, the indexed BED file is read
and the features present in the selected region are retrieved.
1 | read.bedix(file, subset.reg = NULL, header = TRUE)
|
file |
a BED file containing the data to be read.
It should be compressed with |
subset.reg |
a data.frame or GRanges object with the regions to subset from. If a data.frame, it must have columns named 'chr', 'start' and 'end'. |
header |
should the first line of |
a data.frame with the retrieved BED information.
Jean Monlong, Diego Garrido-Martín
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