add_in_taxa: Adds in taxa if silva database Returns MetaScope Table with...

In compbiomed/MetaScope: Tools and functions for preprocessing 16S and metagenomic sequencing microbiome data

Adds in taxa if silva database Returns MetaScope Table with silva taxa in separate columns

Description

Adds in taxa if silva database Returns MetaScope Table with silva taxa in separate columns

Usage

add_in_taxa(combined_pre, caching, path_to_write)

Arguments

combined_pre	MetaScope ID file with silva taxa
caching	Boolean for if all_silva_headers.rds is already downloaded
path_to_write	Path to save all_silva_headers.rds

compbiomed/MetaScope documentation built on Nov. 5, 2024, 9:25 p.m.