inputSubset: ChIP-seq bam file stored as spp tag-list for a subset of...

In carmencita/chic.data: ChIC package data

Description

Example data for manual and vignette. Tag-list created with the read.bam.tags() function from spp package for the input data. The original bam file has been dowloaded from ENCODE (ID: ENCFF000BDQ).

Usage

data(inputSubset)

Format

list of 2 elements containing the reads and the read quality of the input.

• tags : list containing the start coordinates of each read aligned (input) (3'end)

• quality: list containing the read quality of each read

carmencita/chic.data documentation built on May 2, 2021, 5:09 p.m.