chipSubset: ChIP-seq bam file stored as spp tag-list for a subset of...
In carmencita/chic.data: ChIC package data
Description
Example data for manual and vignette.
tag-list created with the
read.bam.tags() function from spp package.
The original bam file has been dowloaded from ENCODE
(ID: ENCFF000BFX).
Usage
1
Format
list of 2 elements containing the reads and the
read quality of the ChIP.
tags : list containing the start coordinates
of each read aligned (ChIP) (3'end)
quality: list containing the read quality
of each read
carmencita/chic.data documentation built on May 2, 2021, 5:09 p.m.
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Description
Example data for manual and vignette. tag-list created with the read.bam.tags() function from spp package. The original bam file has been dowloaded from ENCODE (ID: ENCFF000BFX).
Usage
1 |
Format
list of 2 elements containing the reads and the read quality of the ChIP.
tags : list containing the start coordinates of each read aligned (ChIP) (3'end)
quality: list containing the read quality of each read
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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