plot_hvg_fit: Plot fit of a HVG metric and highlight HVGs.
In bioinfocz/scdrake: A pipeline for droplet-based single-cell RNA-seq data secondary analysis implemented in the drake Make-like toolkit for R language
plot_hvg_fit R Documentation
Plot fit of a HVG metric and highlight HVGs.
Description
Plot fit of a HVG metric and highlight HVGs.
Usage
plot_hvg_fit(sce, y = c("var", "cv2"))
Arguments
sce
A SingleCellExperiment object with HVG metadata.
y
A character scalar: which column from HVG fit DataFrame to plot on the y-axe.
var or cv2 if hvg_metric is gene_var or gene_cv2, respectively.
Value
Invisibly NULL (drawing on a graphical device).
bioinfocz/scdrake documentation built on Sept. 19, 2024, 4:43 p.m.
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| plot_hvg_fit | R Documentation |
Plot fit of a HVG metric and highlight HVGs.
Description
Plot fit of a HVG metric and highlight HVGs.
Usage
plot_hvg_fit(sce, y = c("var", "cv2"))
Arguments
sce |
A |
y |
A character scalar: which column from HVG fit |
Value
Invisibly NULL (drawing on a graphical device).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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