create_seu_for_heatmaps: Create a 'Seurat' object used for heatmap generation.
In bioinfocz/scdrake: A pipeline for droplet-based single-cell RNA-seq data secondary analysis implemented in the drake Make-like toolkit for R language
create_seu_for_heatmaps R Documentation
Create a Seurat object used for heatmap generation.
Description
Create a Seurat object used for heatmap generation.
Usage
create_seu_for_heatmaps(sce_dimred, calc_zscore = TRUE)
Arguments
sce_dimred
A SingleCellExperiment object with calculated dimreds.
calc_zscore
A logical scalar: if TRUE, calculate z-scores of UMI counts in assays$RNA@scale.data slot.
Value
A Seurat object.
bioinfocz/scdrake documentation built on Sept. 19, 2024, 4:43 p.m.
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| create_seu_for_heatmaps | R Documentation |
Create a Seurat object used for heatmap generation.
Description
Create a Seurat object used for heatmap generation.
Usage
create_seu_for_heatmaps(sce_dimred, calc_zscore = TRUE)
Arguments
sce_dimred |
A |
calc_zscore |
A logical scalar: if |
Value
A Seurat object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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