plot_colData: A wrapper for 'scater::plotColData()'.

In bioinfocz/scdrake: A pipeline for droplet-based single-cell RNA-seq data secondary analysis implemented in the drake Make-like toolkit for R language

A wrapper for scater::plotColData().

Description

Can add title, scales and number of each logical level (TRUE, FALSE) used for coloring.

Usage

plot_colData(
  ...,
  title = "",
  scale_x = NULL,
  scale_y = NULL,
  add_logical_counts = TRUE
)

Arguments

...	Parameters passed to scater::plotColData().
title	A characater scalr: main title of plot.
scale_x, scale_y	A ggplot2 scale, e.g. ggplot2::scale_x_log10().
add_logical_counts	A logical scalar: if TRUE, add number of each logical level (TRUE, FALSE) used for coloring.

Value

A ggplot2 object.

bioinfocz/scdrake documentation built on Sept. 19, 2024, 4:43 p.m.