getGenome: Get a GRanges object from bundled compartmap genomes
In biobenkj/compartmap: Higher-order chromatin domain inference in single samples from methylation arrays and single cells from scRNA-seq and scATAC-seq
getGenome R Documentation
Get a GRanges object from bundled compartmap genomes
Description
Get a GRanges object from bundled compartmap genomes
Usage
getGenome(genome = c("hg19", "hg38", "mm9", "mm10"), type = "genome")
Arguments
genome
The desired genome to use ("hg19", "hg38", "mm9", "mm10")
type
The type of data - full genome or open sea regions
Value
Granges of the genome
Examples
hg19 <- getGenome(genome = "hg19")
biobenkj/compartmap documentation built on April 5, 2025, 9:17 a.m.
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| getGenome | R Documentation |
Get a GRanges object from bundled compartmap genomes
Description
Get a GRanges object from bundled compartmap genomes
Usage
getGenome(genome = c("hg19", "hg38", "mm9", "mm10"), type = "genome")
Arguments
genome |
The desired genome to use ("hg19", "hg38", "mm9", "mm10") |
type |
The type of data - full genome or open sea regions |
Value
Granges of the genome
Examples
hg19 <- getGenome(genome = "hg19")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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