list.responses.continuous.single: Investigate association of a continuous variable and the...

In antagomir/netresponse: Functional Network Analysis

Investigate association of a continuous variable and the modes

Description

Investigate association of a continuous variable and the modes.

Usage

list.responses.continuous.single(
  annotation.df,
  groupings,
  method = "t-test",
  pth = Inf,
  verbose = TRUE,
  rounding = NULL,
  adjust.p = TRUE
)

Arguments

annotation.df	annotation data.frame with discrete factor levels, rows named by the samples
groupings	Sample mode information. Each element corresponds to one of the modes and lists the samples assignment matrix qofz. Alternatively, a vector of mode indices named by the samples can be given.
method	method for quantifying the association
pth	p-value threshold (for adjusted p-values)
verbose	verbose
rounding	rounding digits
adjust.p	Adjust p-values (this will add p.adj column and remove pvalue column in the output table)

Value

Table listing all associations between the factor levels and responses

Author(s)

Contact: Leo Lahti [e-mail]

References

See citation('netresponse')

Examples

res <- list.responses.continuous.single(annotation.df = NULL, groupings = NULL)

antagomir/netresponse documentation built on March 30, 2023, 7:24 a.m.