API for andreaskapou/Melissa
Bayesian clustering and imputationa of single cell methylomes
| Global functions | |
|---|---|
| .add_func | Source code |
| .align_cluster | Source code |
| .bprmeth_EM | Source code |
| .datatable.aware | Man page |
| .do_scEM_checks | Source code |
| .impute_files_internal | Source code |
| .onLoad | Source code |
| .parallel_cores | Source code |
| .process_bismark_file | Source code |
| .update_Ez | Source code |
| Melissa | Man page |
| ari_jitter_plot | Source code |
| auc_jitter_plot | Source code |
| binarise_files | Man page Source code |
| boxplot_theme | Source code |
| cluster_ari | Man page Source code |
| cluster_error | Man page Source code |
| create_melissa_data_obj | Man page Source code |
| draw_predictive | Source code |
| eff_jitter_plot | Source code |
| errorbars_plot | Source code |
| eval_cluster_performance | Man page Source code |
| eval_imputation_performance | Man page Source code |
| extract_y | Man page Source code |
| filter_by_coverage_across_cells | Man page Source code |
| filter_by_cpg_coverage | Man page Source code |
| filter_by_variability | Man page Source code |
| filter_cpgs, | Man page |
| filter_regions | Man page |
| gg_theme | Source code |
| impute_met_files | Man page Source code |
| impute_test_met | Man page Source code |
| init_design_matrix | Man page Source code |
| line_theme | Source code |
| line_theme_synth | Source code |
| log_sum_exp | Man page Source code |
| melissa | Man page Source code |
| melissa_cluster, | Man page |
| melissa_encode_dt | Man page |
| melissa_filter | Man page |
| melissa_gibbs | Man page Source code |
| melissa_impute, | Man page |
| melissa_inner | Source code |
| melissa_synth_dt | Man page |
| melissa_vb | Man page |
| partition_dataset | Man page Source code |
| plot_melissa_profiles | Man page Source code |
