get_met_probes_info: Get HM450/EPIC manifest files from Sesame package
In TransBioInfoLab/MethReg: Assessing the regulatory potential of DNA methylation regions or sites on gene transcription
get_met_probes_info R Documentation
Get HM450/EPIC manifest files from Sesame package
Description
Returns a data frame with HM450/EPIC manifest information
files from Sesame package
Usage
get_met_probes_info(genome = c("hg38", "hg19"), arrayType = c("450k", "EPIC"))
Arguments
genome
Human genome of reference hg38 or hg19
arrayType
"450k" or "EPIC" array
Value
A Granges with the DNAm array manifest
Examples
regions.names <- c("chr22:18267969-18268249","chr23:18267969-18268249")
regions.gr <- make_granges_from_names(regions.names)
make_names_from_granges(regions.gr)
TransBioInfoLab/MethReg documentation built on July 28, 2023, 9:17 p.m.
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| get_met_probes_info | R Documentation |
Get HM450/EPIC manifest files from Sesame package
Description
Returns a data frame with HM450/EPIC manifest information files from Sesame package
Usage
get_met_probes_info(genome = c("hg38", "hg19"), arrayType = c("450k", "EPIC"))
Arguments
genome |
Human genome of reference hg38 or hg19 |
arrayType |
"450k" or "EPIC" array |
Value
A Granges with the DNAm array manifest
Examples
regions.names <- c("chr22:18267969-18268249","chr23:18267969-18268249")
regions.gr <- make_granges_from_names(regions.names)
make_names_from_granges(regions.gr)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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