UMI4C2dds: UMI4Cats object to DDS object.
In Pasquali-lab/UMI4Cats: UMI4Cats: Processing, analysis and visualization of UMI-4C chromatin contact data
UMI4C2dds R Documentation
UMI4Cats object to DDS object.
Description
Transforms an UMI4C object to a DDS object
Usage
UMI4C2dds(umi4c, design = ~condition)
Arguments
umi4c
UMI4C object as generated by makeUMI4C or the
UMI4C constructor.
design
A formula or matrix. The formula expresses how
the counts for each fragment end depend on the variables in colData.
See DESeqDataSet.
Value
DDS object.
Pasquali-lab/UMI4Cats documentation built on Nov. 3, 2024, 3:10 p.m.
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| UMI4C2dds | R Documentation |
UMI4Cats object to DDS object.
Description
Transforms an UMI4C object to a DDS object
Usage
UMI4C2dds(umi4c, design = ~condition)
Arguments
umi4c |
UMI4C object as generated by |
design |
A |
Value
DDS object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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