view_available_txdb: Retrieve ensembl biomart

In CshlSiepelLab/tuSelecter2: Deconvolution of Expression for Nascent RNA Sequencing Data

Description

Convenience function for retrieving information about available ensembl marts that can be turned into TxDbs.

Usage

view_available_txdb(species = NULL, ensembl_version = NULL)

Arguments

species	the species to download the TxDb for. Use the first letter of the genus and the full species as one string (e.g. homo sapiens -> hsapiens). If not specified will return all species.
ensembl_version	The Ensembl release version. Defaults to current release.

Value

A data.frame of available datasets

CshlSiepelLab/tuSelecter2 documentation built on July 18, 2021, 5:09 p.m.