ChenWeiyan/LandSCENT: Landscape Single Cell Entropy

LandSCENT (Landscape Single Cell Entropy) is a R-package for the analysis of single-cell RNA-Seq data. One important feature of this package is the computation of signaling entropy, which allows single cells to be ordered according to differentiation potency. LandSCENT also integrates cell density with potency distribution to dissect cell types across all potency states and generates high-quality figures to show this.

Getting started

Package details

AuthorWeiyan Chen, Andrew E Teschendorff
Bioconductor views CellBiology GeneExpression Network RNASeq SingleCell Software SystemsBiology Transcriptomics Visualization
MaintainerWeiyan Chen <chenweiyan1208@gmail.com>
LicenseGPL-3
Version0.99.5
URL https://github.com/ChenWeiyan/LandSCENT
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("ChenWeiyan/LandSCENT")
ChenWeiyan/LandSCENT documentation built on Aug. 28, 2020, 9:55 p.m.