microRNAs: Extract microRNA or tRNA genomic ranges from an object

In Bioconductor/GenomicFeatures: Query the gene models of a given organism/assembly

Extract microRNA or tRNA genomic ranges from an object

Description

Generic functions to extract microRNA or tRNA genomic ranges from an object. This page documents the methods for TxDb objects only.

Usage

microRNAs(x)
## S4 method for signature 'TxDb'
microRNAs(x)

tRNAs(x)
## S4 method for signature 'TxDb'
tRNAs(x)

Arguments

x	A TxDb object.

Value

A GRanges object.

Author(s)

M. Carlson

See Also

• transcripts, transcriptsBy, and transcriptsByOverlaps for the core genomic features extractors.

• The TxDb class.

Examples

## Not run: library(TxDb.Hsapiens.UCSC.hg19.knownGene)
library(mirbase.db)
microRNAs(TxDb.Hsapiens.UCSC.hg19.knownGene)

## End(Not run)

Bioconductor/GenomicFeatures documentation built on Nov. 7, 2024, 4:25 a.m.