features: Extract simple features from a FeatureDb object
In Bioconductor/GenomicFeatures: Query the gene models of a given organism/assembly
features R Documentation
Extract simple features from a FeatureDb object
Description
WARNING: The FeatureDb/makeFeatureDbFromUCSC/features code base is
no longer actively maintained and FeatureDb-related functionalities
might get deprecated in the near future. Please use
makeFeatureDbFromUCSC for a convenient way to
import transcript annotations from UCSC online resources into
Bioconductor.
Generic function to extract genomic features from a FeatureDb object.
Usage
features(x)
## S4 method for signature 'FeatureDb'
features(x)
Arguments
x
A FeatureDb object.
Value
a GRanges object
Author(s)
M. Carlson
See Also
FeatureDb
Examples
fdb <- loadDb(system.file("extdata", "FeatureDb.sqlite",
package="GenomicFeatures"))
features(fdb)
Bioconductor/GenomicFeatures documentation built on Nov. 7, 2024, 4:25 a.m.
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| features | R Documentation |
Extract simple features from a FeatureDb object
Description
WARNING: The FeatureDb/makeFeatureDbFromUCSC/features code base is
no longer actively maintained and FeatureDb-related functionalities
might get deprecated in the near future. Please use
makeFeatureDbFromUCSC for a convenient way to
import transcript annotations from UCSC online resources into
Bioconductor.
Generic function to extract genomic features from a FeatureDb object.
Usage
features(x)
## S4 method for signature 'FeatureDb'
features(x)
Arguments
x |
A FeatureDb object. |
Value
a GRanges object
Author(s)
M. Carlson
See Also
FeatureDb
Examples
fdb <- loadDb(system.file("extdata", "FeatureDb.sqlite",
package="GenomicFeatures"))
features(fdb)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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