makeTxDbPackage: [Moved to txdbmaker] Making a TxDb package from annotations...

In Bioconductor/GenomicFeatures: Query the gene models of a given organism/assembly

[Moved to txdbmaker] Making a TxDb package from annotations available at the UCSC Genome Browser, biomaRt or from another source.

Description

IMPORTANT NOTE: Starting with BioC 3.19, functions makeTxDbPackageFromUCSC(), makeFDbPackageFromUCSC(), makeTxDbPackageFromBiomart(), makeTxDbPackage() supportedMiRBaseBuildValues() and makePackageName() are defined in the txdbmaker package.

See Also

txdbmaker::makeTxDbPackageFromUCSC, txdbmaker::makeFDbPackageFromUCSC, txdbmaker::makeTxDbPackageFromBiomart, txdbmaker::makeTxDbPackage, txdbmaker::supportedMiRBaseBuildValues, and txdbmaker::makePackageName in the txdbmaker package.

Bioconductor/GenomicFeatures documentation built on Nov. 7, 2024, 4:25 a.m.