associate_histone_marks: Associate histone marks to a GRanges object.
In ArnaudDroitLab/ef.utils: Eric Utilities
Description
Usage
Arguments
Value
View source: R/AnnotationHelper.R
Description
Associate histone marks to a GRanges object.
Usage
1
associate_histone_marks(regions, histone.regions)
Arguments
regions
A GRanges object to annotate.
genome.build
The name of the chosen annotation ("hg38", "mm9", "mm10", "hg19").
biosample
The biosample identifier from ENCODE. Valid examples are
GM12878, K562 or MCF-7.
Value
The GRanges object with associated histone overlap percentage.
ArnaudDroitLab/ef.utils documentation built on Aug. 13, 2019, 9:09 p.m.
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Description Usage Arguments Value
View source: R/AnnotationHelper.R
Description
Associate histone marks to a GRanges object.
Usage
1 | associate_histone_marks(regions, histone.regions)
|
Arguments
regions |
A GRanges object to annotate. |
genome.build |
The name of the chosen annotation ("hg38", "mm9", "mm10", "hg19"). |
biosample |
The biosample identifier from ENCODE. Valid examples are GM12878, K562 or MCF-7. |
Value
The GRanges object with associated histone overlap percentage.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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