plot_split_violin_with_boxplot: Plot split violin plot (convenient to compare distribution...

In proBatch: Tools for Diagnostics and Corrections of Batch Effects in Proteomics

Description

Plot split violin plot (convenient to compare distribution before and after)

Usage

plot_split_violin_with_boxplot(
  df,
  y_col = "y",
  col_for_color = "m",
  col_for_box = "x",
  colors_for_plot = c("#8f1811", "#F8C333"),
  hlineintercept = NULL,
  plot_title = NULL,
  theme = "classic"
)

Arguments

df	data.frame with y_col, col_for_color, col_for_box
y_col	value to explore the distribution of
col_for_color	column to use to map to two colors
col_for_box	column to use to do group comparison
colors_for_plot	colors to map to col_for_color
hlineintercept	NULL: no intercept line; non-null: intercept value
plot_title	title of the plot (e.g., processing step + representation level (fragments, transitions, proteins) + purpose (meanplot/corrplot etc))
theme	ggplot theme, by default classic. Can be easily overriden

Value

ggplot object

proBatch documentation built on Nov. 8, 2020, 4:55 p.m.