subvert: Vertices with an attribute

In martini: GWAS Incorporating Networks

Description

Returns the nodes matching some condition.

Usage

subvert(net, attr, values, affirmative = TRUE)

Arguments

net	An igraph network.
attr	An attribute of the vertices.
values	Possible values of attr
affirmative	Logical. States if a condition must be its affirmation (e.g. all nodes with gene name "X"), or its negation (all nodes not with gene name "X").

Value

The vertices with attribute equal to any of the values in values.

Examples

gi <- get_GI_network(minigwas, snpMapping = minisnpMapping, ppi = minippi)
martini:::subvert(gi, "gene", "A")
martini:::subvert(gi, "name", c("1A1", "1A3"))

martini documentation built on Nov. 8, 2020, 5:39 p.m.