get_ppi: Get protein-protein interactions.
In martini: GWAS Incorporating Networks
Description
Usage
Arguments
Value
Examples
Description
Get all protein-protein interactions for an organism from
BioGRID.
Usage
1
get_ppi(organism = 9606)
Arguments
organism
Organism: human represents human, arabidopsis for Arabidopsis
thaliana, etc.
Value
A data.frame with two columns with pairs of interacting proteins.
Examples
1
2
# download dog interactions
martini:::get_ppi(9615)
martini documentation built on Nov. 8, 2020, 5:39 p.m.
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Description Usage Arguments Value Examples
Description
Get all protein-protein interactions for an organism from BioGRID.
Usage
1 | get_ppi(organism = 9606)
|
Arguments
organism |
Organism: human represents human, arabidopsis for Arabidopsis thaliana, etc. |
Value
A data.frame with two columns with pairs of interacting proteins.
Examples
1 2 | # download dog interactions
martini:::get_ppi(9615)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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