DiStatis-TrajPlot: Plot a 'TrajPlot' of a DiStatis object

In kimod: A k-tables approach to integrate multiple Omics-Data

Description

Plot a TrajPlot of a DiStatis object

Usage

## S4 method for signature 'DiStatis'
TrajPlot(x,xlabT="Dim 1", ylabT="Dim 2",
mainTraj=NULL,legend=TRUE ,xlimi=NULL,ylimi=NULL,panel=TRUE,
colours=NULL,...)

Arguments

x	DiStatis class object.
xlabT	character for the x-label title for plot
ylabT	character for the y-label title for plot
mainTraj	the main proj plot
legend	Logical. Indicates whether the legend prints
xlimi	vector bounds to x-axes.
ylimi	vector bounds to y-axes.
panel	logical if is true, the trajectories are plotted in panel-plot
colours	for plot
...	additional parameters for plot

Value

plotted Trajectories Plot of the given DiStatis object.

Author(s)

M L Zingaretti, J A Demey-Zambrano, J L Vicente Villardon, J R Demey

Examples

{
Z2<-DiStatis(NCI60Selec,Scale=TRUE,Center=TRUE)
Colores2<-c(rep(colors()[657],5),rep(colors()[637],6),
rep(colors()[537],7),rep(colors()[552],6),rep(colors()[57],10)
,rep(colors()[300],8),rep(colors()[461],7),rep(colors()[450],2)
,rep(colors()[432],7))
Colores1<-c(rep("Breast",5),rep("CNS",6),rep("Colon",7)
,rep("Leukemia",6),rep("Melanoma",10),rep("Lung",8),rep("Ovarian",7)
,rep("Prostate",2),rep("Renal",7))
TrajPlot(Z2,xlabT = "",ylabT="",colours=Colores2,legend=FALSE)
legend("topleft",unique(Colores1),col=unique(Colores2),bty="n",pch=16,cex=1)

}

kimod documentation built on April 28, 2020, 9:21 p.m.