get_consensus-ConsensusPartition-method: Get consensus matrix
In cola: A Framework for Consensus Partitioning
Description
Usage
Arguments
Details
Value
Author(s)
Examples
Description
Get consensus matrix
Usage
1
2
## S4 method for signature 'ConsensusPartition'
get_consensus(object, k)
Arguments
object
A ConsensusPartition-class object.
k
Number of subgroups.
Details
For row i and column j in the consensus matrix, the value of corresponding x_ij
is the probability of sample i and sample j being in the same group from all partitions.
Value
A consensus matrix corresponding to the current k.
Author(s)
Zuguang Gu <z.gu@dkfz.de>
Examples
1
2
3
data(golub_cola)
obj = golub_cola["ATC", "skmeans"]
get_consensus(obj, k = 2)
cola documentation built on Nov. 8, 2020, 8:12 p.m.
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Description Usage Arguments Details Value Author(s) Examples
Description
Get consensus matrix
Usage
1 2 | ## S4 method for signature 'ConsensusPartition'
get_consensus(object, k)
|
Arguments
object |
A |
k |
Number of subgroups. |
Details
For row i and column j in the consensus matrix, the value of corresponding x_ij is the probability of sample i and sample j being in the same group from all partitions.
Value
A consensus matrix corresponding to the current k.
Author(s)
Zuguang Gu <z.gu@dkfz.de>
Examples
1 2 3 | data(golub_cola)
obj = golub_cola["ATC", "skmeans"]
get_consensus(obj, k = 2)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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