caClass-class: caClass

Description Slots Author(s)

Description

Stores the results of any of the omicsPCA analyses.

Slots

InitialData

List of ExpressionSets, one for each set of omics data

Names

Character vector giving names for the input data

preprocessing

Character vector describing the preprocessing applied to the data

preproData

List of matrices containing data after preprocessing

caMethod

Character giving the component analysis method name

commonComps

Numeric giving the number of common components

distComps

Numeric vector giving the number of distinctive components for each block

scores

List of matrices of common and distinctive scores

loadings

List of matrices of common and distinctive loadings

VAF

List of matrices indicating VAF (Variability Explained For) for each component in each block of data

others

List containing other miscellaneous information specific to different SCA methods

Author(s)

Patricia Sebastian Leon


STATegRa documentation built on Nov. 8, 2020, 5:26 p.m.