segReadsGeneric: Perform genome segmentation depending
In PICS: Probabilistic inference of ChIP-seq

Perform genome segmentation depending

segReadsGeneric(
  data,
  dataC = NULL,
  map = NULL,
  minReads = 2,
  minReadsInRegion = 3,
  jitter = FALSE,
  maxLregion = 0,
  minLregion = 100,
  step = 20,
  width = 250,
  package = "PICS"
)

`data`	A `GRanges` object containing the IP reads. See details for more information on how to set up the data.
`dataC`	A `GRanges` object containing the control reads. Set to NULL by default, i.e. no control.
`map`	A `GRanges` object containing the mappability profiles. Set to NULL by default, i.e. no profiles.
`minReads`	A `numeric`. The minimum number of F/R reads to be present in the sliding window.
`minReadsInRegion`	A `numeric`. The minimum number of F/R reads to be present in the region.
`jitter`	A `logical` value stating whether some noise should be added to the read locations. This is recommended if the read positions have lots of duplicates.
`maxLregion`	A `numeric`. The maximum length.
`minLregion`	A `numeric`. The minimum length.
`step`	A `numeric`. The increment of the sliding window.
`width`	A `numeric`. The width of the region.
`package`	A `character`. "PICS" or "PING"