MouseFM
In-silico methods for genetic finemapping in inbred mice

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GRanges2df: GenomicRanges::GRanges object to data frame

GRanges2df: GenomicRanges::GRanges object to data frame
In MouseFM: In-silico methods for genetic finemapping in inbred mice

Description Usage Arguments Value Examples

View source: R/granges_conversion.R

Description

Wrapper for as.data.frame().

Usage

1
GRanges2df(granges)

Arguments

granges

GenomicRanges::GRanges object

Value

Data frame.

Examples

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geno.granges = finemap("chr1",
    start = 5000000, end = 6000000,
    strain1 = c("C57BL_6J"), strain2 = c("AKR_J", "A_J", "BALB_cJ"),
    return_obj = "granges"
)

geno = GRanges2df(geno.granges)

MouseFM documentation built on Nov. 8, 2020, 7:26 p.m.

Related to GRanges2df in MouseFM...

MouseFM index
README.md Fetch homozygous genotypes of inbred mouse strains Finemapping of genetic regions in inbred mice Prioritization of inbred mouse strains for resolving genetic regions

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