muxHeatmap: Create layout plot of flowcell
In IONiseR: Quality Assessment Tools for Oxford Nanopore MinION data
Description
Usage
Arguments
Value
View source: R/plotting_layout.R
Description
Creates a plot representing the layout of a MinION flow cell. Each circle
represents an individual channel with the intensity relecting a specified
sequencing metric. This function is a more generalised version of
layoutPlot, allowing the user to map any value the like on
the channel layout.
Usage
1
muxHeatmap(data, zValue)
Arguments
data
A data.frame. Should have at least two columns,
one of which has the name 'channel'.
zValue
Character string specifying the name of the column to be used
for the colour scaling.
Value
Returns an object of gg representing the plot.
IONiseR documentation built on Nov. 8, 2020, 6 p.m.
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Description Usage Arguments Value
View source: R/plotting_layout.R
Description
Creates a plot representing the layout of a MinION flow cell. Each circle
represents an individual channel with the intensity relecting a specified
sequencing metric. This function is a more generalised version of
layoutPlot, allowing the user to map any value the like on
the channel layout.
Usage
1 | muxHeatmap(data, zValue)
|
Arguments
data |
A data.frame. Should have at least two columns, one of which has the name 'channel'. |
zValue |
Character string specifying the name of the column to be used for the colour scaling. |
Value
Returns an object of gg representing the plot.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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