ggFeatureSegs: generate a ggplot of segments of gene-like regions
In BiocOncoTK: Bioconductor components for general cancer genomics
Description
Usage
Arguments
Value
Note
Examples
Description
generate a ggplot of segments of gene-like regions
Usage
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ggFeatureSegs(
chrname = "chr15",
start = 20450000,
end = 20730000,
db = EnsDb.Hsapiens.v75::EnsDb.Hsapiens.v75,
slstyle = "UCSC",
ylab.in = "ensembl\nnoncoding"
)
Arguments
chrname
character(1) chromosome tag
start
numeric(1) start of interval
end
numeric(1) end of interval
db
EnsDb instance for example
slstyle
character(1) tag for seqlevelsStyle
ylab.in
character(1) for use as y axis tag
Value
ggplot instance
Note
Most annotation is turned off with element_blank()
Examples
1
BiocOncoTK documentation built on Nov. 8, 2020, 6:03 p.m.
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Description Usage Arguments Value Note Examples
Description
generate a ggplot of segments of gene-like regions
Usage
1 2 3 4 5 6 7 8 | ggFeatureSegs(
chrname = "chr15",
start = 20450000,
end = 20730000,
db = EnsDb.Hsapiens.v75::EnsDb.Hsapiens.v75,
slstyle = "UCSC",
ylab.in = "ensembl\nnoncoding"
)
|
Arguments
chrname |
character(1) chromosome tag |
start |
numeric(1) start of interval |
end |
numeric(1) end of interval |
db |
EnsDb instance for example |
slstyle |
character(1) tag for seqlevelsStyle |
ylab.in |
character(1) for use as y axis tag |
Value
ggplot instance
Note
Most annotation is turned off with element_blank()
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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