WfmFitCircadian-class: Class "WfmFitCircadian"

In waveTiling: Wavelet-Based Models for Tiling Array Transcriptome Analysis

Description

class to store model fits with a circadian rhythm design in the wavelet-based transcriptome analysis.

Objects from the Class

Objects can be created by calls of the form new("WfmFitCircadian").

Slots

betaWav:

Object of class "matrix" ~~

varbetaWav:

Object of class "matrix" ~~

smoothPar:

Object of class "matrix" ~~

varEps:

Object of class "numeric" ~~

dataOrigSpace:

Object of class "matrix" ~~

dataWaveletSpace:

Object of class "matrix" ~~

design.matrix:

Object of class "matrix" ~~

phenoData:

Object of class "data.frame" ~~

genome.info:

Object of class "genomeInfo" ~~

n.levels:

Object of class "numeric" ~~

probePosition:

Object of class "numeric" ~~

wave.filt:

Object of class "character" ~~

Kj:

Object of class "numeric" ~~

prior:

Object of class "character" ~~

F:

Object of class "matrix" ~~

varF:

Object of class "matrix" ~~

P:

Object of class "numeric" ~~

Z:

Object of class "matrix" ~~

noGroups:

Object of class "numeric" ~~

replics:

Object of class "numeric" ~~

Extends

Class "WfmFit", directly.

Methods

initialize

signature(.Object = "WfmFitCircadian"): ...

show

signature(object = "WfmFitCircadian"): ...

Author(s)

Kristof De Beuf <[e-mail]>

Examples

showClass("WfmFitCircadian")

waveTiling documentation built on May 2, 2019, 4:46 p.m.