Files in yzheng74/permseq
Mapping protein-DNA interactions in highly repetitive regions of the genomes with prior-enhanced read mapping
DESCRIPTION
DESCRIPTION~
NAMESPACE
NAMESPACE~
R/base_chipMeanCounts.R
R/base_chipMeanCounts_multi.R
R/base_chipMeanCounts_multi.R~
R/base_clusterPositions.R
R/base_clusterPositions_3cluster.R
R/base_clusterPositions_histoneonly.R
R/base_constructBins.R
R/base_constructNeucleotideLevelCounts.R
R/base_dnaseProcess.R
R/base_dnaseProcess.R~
R/base_fast.read.table.R
R/base_fitRlm.R
R/base_grplass.R
R/base_histoneProcess.R
R/base_histoneProcess.R~
R/base_multihistoneProcess.R
R/base_multihistoneProcess.R~
R/base_quantileFunction.R
R/base_refineParameter.R
R/base_summary.R
R/priorClass.R
R/priorGenerate.R
R/priorGenerate.R~
R/priorHistone_init.R
R/priorHistone_multi.R
R/priorMethods.R
R/priorProcess.R
R/priorProcess.R~
R/readAllocate.R
R/readAllocate.R~
README.md
Vignette/permseq_Vignette-knitr.Rnw
Vignette/permseq_Vignette-knitr.Rnw~
Vignette/permseq_Vignette-knitr.pdf
inst/Perl/#mean_chip_multidata.pl#
inst/Perl/count_tags_at_each_nucleotide.pl
inst/Perl/find_uni_bed.pl
inst/Perl/genRef.pl
inst/Perl/mean_chip_multidata.pl
inst/Perl/mean_chip_update.pl
inst/Perl/multi_data_pattern.pl
inst/Perl/prior_result.pl
inst/Perl/process_readfiles_SET.pl
inst/Perl/quantile_perl_table_tagcount.pl
inst/Perl/select_multi_pattern.pl
man/permseq_ext-package.Rd
man/priorClass.Rd
man/priorGenerate.Rd
man/priorHistone_init.Rd
man/priorHistone_multi.Rd
man/priorMethods.Rd
man/priorProcess.Rd
man/readAllocate.Rd
man/readAllocate.Rd~
