reduce_profile: Reduce the full processed profile into supertaxon level
In trvinh/test: PhyloProfile

Reduce data of the phylogenetic profiles from input taxonomy rank into supertaxon level (e.g. from species to phylum)

1	reduce_profile(full_profile)

full_profile

dataframe contains the full processed profiles

A reduced dataframe contains only profiles for the selected rank. This dataframe contains only supertaxa and their value ( mVar2) for each gene.

Vinh Tran tran@bio.uni-frankfurt.de

parse_info_profile for creating a full processed profile dataframe, full_processed_profile for a demo full processed profile dataframe

1 2	data("full_processed_profile", package="phyloprofile") reduce_profile(full_processed_profile)

trvinh/test documentation built on May 9, 2019, 2:26 a.m.

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