arthropodaPhyloProfile: Phylogenetic profiles of Arthropoda taxon set
In trvinh/PhyloProfileData: Data package for phylogenetic profile analysis using PhyloProfile tool
Description
The phylogenetic profile of 1011 ortholog groups across 88 species
was calculated from the BUSCO arthropoda dataset published
from Simão et al.2015 https://doi.org/10.1093/bioinformatics/btv351
Usage
1
Format
A data frame with 5 columns and 54500 rows:
geneIDGene ID, e.g. "97421at6656"
ncbiIDTaxonomy ID of the search species, e.g. "ncbi9598"
orthoIDOrtholog ID, e.g. "97421at6656|PANTR@9598@1|H2QTF9|1"
FAS_FForward FAS score, e.g. "0.6872810"
FAS_BBackward FAS score, e.g. "0.9654661"
trvinh/PhyloProfileData documentation built on June 6, 2019, 8:36 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
The phylogenetic profile of 1011 ortholog groups across 88 species was calculated from the BUSCO arthropoda dataset published from Simão et al.2015 https://doi.org/10.1093/bioinformatics/btv351
Usage
1 |
Format
A data frame with 5 columns and 54500 rows:
geneIDGene ID, e.g. "97421at6656"
ncbiIDTaxonomy ID of the search species, e.g. "ncbi9598"
orthoIDOrtholog ID, e.g. "97421at6656|PANTR@9598@1|H2QTF9|1"
FAS_FForward FAS score, e.g. "0.6872810"
FAS_BBackward FAS score, e.g. "0.9654661"
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.